Protein–RNA interactions for Protein: Q9Z2M6

Ubl3, Ubiquitin-like protein 3, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubl3Q9Z2M6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubl3Q9Z2M6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ubl3Q9Z2M6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubl3Q9Z2M6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubl3Q9Z2M6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubl3Q9Z2M6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubl3Q9Z2M6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubl3Q9Z2M6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubl3Q9Z2M6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Gm27838-201ENSMUST00000184829 128 ntBASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubl3Q9Z2M6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Gm10766-202ENSMUST00000194123 606 ntBASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubl3Q9Z2M6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubl3Q9Z2M6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubl3Q9Z2M6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms