Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Gm15240-201ENSMUST00000118156 720 ntBASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.55□□□□□ -0.4
Phf1Q9Z1B8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Gm5354-201ENSMUST00000182417 973 ntBASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Gm18027-201ENSMUST00000218947 619 ntBASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Phf1Q9Z1B8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Phf1Q9Z1B8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms