Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Gm12384-201ENSMUST00000119228 919 ntBASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Gm14660-201ENSMUST00000119809 575 ntBASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Gm43818-201ENSMUST00000200605 466 ntBASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Gm45841-201ENSMUST00000207700 164 ntBASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcb1Q9Z0H3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.08□□□□□ -0.15
Smarcb1Q9Z0H3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcb1Q9Z0H3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcb1Q9Z0H3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcb1Q9Z0H3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Smarcb1Q9Z0H3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcb1Q9Z0H3 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.08□□□□□ -0.15
Smarcb1Q9Z0H3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Smarcb1Q9Z0H3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Gm12742-201ENSMUST00000117326 410 ntBASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Gm8810-201ENSMUST00000172895 754 ntBASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Gm27731-201ENSMUST00000185192 107 ntBASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Smarcb1Q9Z0H3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcb1Q9Z0H3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms