Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm38225-201ENSMUST00000194001 393 ntBASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cx3cr1Q9Z0D9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Syt7-205ENSMUST00000224135 1557 ntBASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cx3cr1Q9Z0D9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cx3cr1Q9Z0D9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms