Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Atp6ap1Q9R1Q9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atp6ap1Q9R1Q9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.31□□□□□ -0.28
Atp6ap1Q9R1Q9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atp6ap1Q9R1Q9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms