Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Gm43703-201ENSMUST00000200523 763 ntBASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.28□□□□□ -0.44
Sec61a2Q9JLR1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61a2Q9JLR1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Gm15460-201ENSMUST00000118147 391 ntBASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Gm15487-201ENSMUST00000122373 465 ntBASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Gm9229-201ENSMUST00000222777 126 ntBASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61a2Q9JLR1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a2Q9JLR1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms