Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Gm7977-201ENSMUST00000193787 748 ntBASIC12.18□□□□□ -0.46
Trem1Q9JKE2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.18□□□□□ -0.46
Trem1Q9JKE2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trem1Q9JKE2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Gm18489-201ENSMUST00000172565 551 ntBASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trem1Q9JKE2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms