Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Gm13312-201ENSMUST00000119631 718 ntBASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.88□□□□□ -0.67
Smco4Q9JIS3 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Map1b-203ENSMUST00000223725 2669 ntBASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Gm13464-201ENSMUST00000119418 935 ntBASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Gm13836-201ENSMUST00000121159 501 ntBASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Gm22697-201ENSMUST00000175194 63 ntBASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco4Q9JIS3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Rprl3-201ENSMUST00000157400 290 ntBASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms