Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne8Q9DC53 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne8Q9DC53 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Gm27989-201ENSMUST00000184721 107 ntBASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Cpne8Q9DC53 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.17□□□□□ -0.14
Cpne8Q9DC53 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms