Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chmp4bQ9D8B3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Gm21854-201ENSMUST00000179901 471 ntBASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp4bQ9D8B3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Gm24694-201ENSMUST00000180054 110 ntBASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Gm27663-201ENSMUST00000184839 110 ntBASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Chmp4bQ9D8B3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Gm17330-201ENSMUST00000221047 165 ntBASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Chmp4bQ9D8B3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Gm14719-201ENSMUST00000121891 340 ntBASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp4bQ9D8B3 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms