Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp4cQ9D7F7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp4cQ9D7F7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.32■□□□□ 0.2
Chmp4cQ9D7F7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp4cQ9D7F7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp4cQ9D7F7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Chmp4cQ9D7F7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Gm37935-201ENSMUST00000192012 982 ntBASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Gm29741-201ENSMUST00000192667 421 ntBASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp4cQ9D7F7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Gm27622-201ENSMUST00000183779 60 ntBASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Gm46209-201ENSMUST00000217912 553 ntBASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp4cQ9D7F7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Gm27618-201ENSMUST00000183671 60 ntBASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Gm27533-201ENSMUST00000183800 152 ntBASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp4cQ9D7F7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms