Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim42Q9D2H5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.63□□□□□ -0.23
Trim42Q9D2H5 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim42Q9D2H5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim42Q9D2H5 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Gm13884-201ENSMUST00000118103 829 ntBASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Gm27628-201ENSMUST00000184911 107 ntBASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Gm15590-201ENSMUST00000078419 552 ntBASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim42Q9D2H5 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms