Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd1Q9D0E3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Gm15881-201ENSMUST00000148792 942 ntBASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Gm28693-202ENSMUST00000190758 331 ntBASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Gm9139-201ENSMUST00000218817 700 ntBASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Gm10312-201ENSMUST00000078515 489 ntBASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Gm25201-201ENSMUST00000083093 170 ntBASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lysmd1Q9D0E3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lysmd1Q9D0E3 App-207ENSMUST00000227737 2827 ntBASIC14.33□□□□□ -0.11
Lysmd1Q9D0E3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Lysmd1Q9D0E3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lysmd1Q9D0E3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lysmd1Q9D0E3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Gm23251-201ENSMUST00000103773 110 ntBASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Gm15515-201ENSMUST00000117827 822 ntBASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Gm1821-202ENSMUST00000227415 750 ntBASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lysmd1Q9D0E3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms