Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Gm37714-201ENSMUST00000194742 342 ntBASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Gm44492-201ENSMUST00000197012 141 ntBASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd1lQ9CXF7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chd1lQ9CXF7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Nudt18-202ENSMUST00000228554 3619 ntBASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chd1lQ9CXF7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms