Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Gm4875-201ENSMUST00000118257 786 ntBASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim11Q99PQ2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.51■□□□□ 0.07
Trim11Q99PQ2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Gm15240-201ENSMUST00000118156 720 ntBASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim11Q99PQ2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Gm15770-201ENSMUST00000117498 584 ntBASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Gm18905-201ENSMUST00000205454 928 ntBASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim11Q99PQ2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms