Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.28□□□□□ -0.28
Msh4Q99MT2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msh4Q99MT2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msh4Q99MT2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Msh4Q99MT2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msh4Q99MT2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.27□□□□□ -0.28
Msh4Q99MT2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Msh4Q99MT2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msh4Q99MT2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msh4Q99MT2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Msh4Q99MT2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.27□□□□□ -0.29
Msh4Q99MT2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.27□□□□□ -0.29
Msh4Q99MT2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Msh4Q99MT2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Msh4Q99MT2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Gm6218-201ENSMUST00000219812 628 ntBASIC13.27□□□□□ -0.29
Msh4Q99MT2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.27□□□□□ -0.29
Msh4Q99MT2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh4Q99MT2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Gm21470-201ENSMUST00000187680 696 ntBASIC13.26□□□□□ -0.29
Msh4Q99MT2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.26□□□□□ -0.29
Msh4Q99MT2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.26□□□□□ -0.29
Msh4Q99MT2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.26□□□□□ -0.29
Msh4Q99MT2 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.26□□□□□ -0.29
Msh4Q99MT2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Msh4Q99MT2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.25□□□□□ -0.29
Msh4Q99MT2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Msh4Q99MT2 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms