Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gm27533-201ENSMUST00000183800 152 ntBASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gm38294-201ENSMUST00000192831 381 ntBASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gm44608-201ENSMUST00000206827 855 ntBASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Shd-206ENSMUST00000225145 998 ntBASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Gm27618-201ENSMUST00000183671 60 ntBASIC13.21□□□□□ -0.29
Rnf111Q99ML9 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.21□□□□□ -0.29
Rnf111Q99ML9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf111Q99ML9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rnf111Q99ML9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rnf111Q99ML9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf111Q99ML9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf111Q99ML9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Rnf111Q99ML9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf111Q99ML9 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.21□□□□□ -0.3
Rnf111Q99ML9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.21□□□□□ -0.3
Rnf111Q99ML9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Rnf111Q99ML9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Gm12428-201ENSMUST00000119844 727 ntBASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf111Q99ML9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms