Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx6-1Q99MA9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Gm17376-201ENSMUST00000166016 84 ntBASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Gm2383-201ENSMUST00000181461 807 ntBASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Gm6082-201ENSMUST00000215204 454 ntBASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx6-1Q99MA9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Gm22323-201ENSMUST00000103832 109 ntBASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Gm24255-201ENSMUST00000104481 128 ntBASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Gm12997-201ENSMUST00000120207 640 ntBASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Gm6621-201ENSMUST00000193251 772 ntBASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx6-1Q99MA9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms