Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.94□□□□□ -0.5
Scrt1Q99M85 Gm15376-201ENSMUST00000122258 783 ntBASIC11.94□□□□□ -0.5
Scrt1Q99M85 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.94□□□□□ -0.5
Scrt1Q99M85 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Gm27243-201ENSMUST00000183964 521 ntBASIC11.94□□□□□ -0.5
Scrt1Q99M85 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.94□□□□□ -0.5
Scrt1Q99M85 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Gm9823-201ENSMUST00000051212 327 ntBASIC11.94□□□□□ -0.5
Scrt1Q99M85 Gm24526-201ENSMUST00000082921 158 ntBASIC11.94□□□□□ -0.5
Scrt1Q99M85 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.94□□□□□ -0.5
Scrt1Q99M85 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Scrt1Q99M85 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.93□□□□□ -0.5
Scrt1Q99M85 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.93□□□□□ -0.5
Scrt1Q99M85 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.93□□□□□ -0.5
Scrt1Q99M85 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scrt1Q99M85 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scrt1Q99M85 Gm15240-201ENSMUST00000118156 720 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms