Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Mir7023-201ENSMUST00000185093 64 ntBASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Gm9229-201ENSMUST00000222777 126 ntBASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Chmp1b1Q99LU0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chmp1b1Q99LU0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Chmp1b1Q99LU0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chmp1b1Q99LU0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Gm13453-201ENSMUST00000118708 357 ntBASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp1b1Q99LU0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp1b1Q99LU0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms