Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
Col20a1Q923P0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Col20a1Q923P0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.02■□□□□ 0.16
Col20a1Q923P0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Gm12203-201ENSMUST00000118235 598 ntBASIC16.02■□□□□ 0.16
Col20a1Q923P0 Gm12209-201ENSMUST00000120089 596 ntBASIC16.02■□□□□ 0.16
Col20a1Q923P0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.02■□□□□ 0.16
Col20a1Q923P0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Gm43818-201ENSMUST00000200605 466 ntBASIC16.02■□□□□ 0.16
Col20a1Q923P0 Gm43630-201ENSMUST00000201550 776 ntBASIC16.02■□□□□ 0.16
Col20a1Q923P0 Gm45841-201ENSMUST00000207700 164 ntBASIC16.02■□□□□ 0.16
Col20a1Q923P0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Gm29705-201ENSMUST00000212598 474 ntBASIC16.02■□□□□ 0.16
Col20a1Q923P0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.02■□□□□ 0.16
Col20a1Q923P0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.02■□□□□ 0.16
Col20a1Q923P0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Col20a1Q923P0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col20a1Q923P0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col20a1Q923P0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col20a1Q923P0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Col20a1Q923P0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.02■□□□□ 0.15
Col20a1Q923P0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col20a1Q923P0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col20a1Q923P0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Col20a1Q923P0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col20a1Q923P0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col20a1Q923P0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Col20a1Q923P0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.01■□□□□ 0.15
Col20a1Q923P0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Mir1938-201ENSMUST00000158746 100 ntBASIC16.01■□□□□ 0.15
Col20a1Q923P0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.01■□□□□ 0.15
Col20a1Q923P0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col20a1Q923P0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Col20a1Q923P0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Gm12384-201ENSMUST00000119228 919 ntBASIC16■□□□□ 0.15
Col20a1Q923P0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16■□□□□ 0.15
Col20a1Q923P0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16■□□□□ 0.15
Col20a1Q923P0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16■□□□□ 0.15
Col20a1Q923P0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Gm40466-201ENSMUST00000212174 422 ntBASIC16■□□□□ 0.15
Col20a1Q923P0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Gm16372-201ENSMUST00000073088 450 ntBASIC16■□□□□ 0.15
Col20a1Q923P0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Gm42872-201ENSMUST00000200026 1967 ntBASIC16■□□□□ 0.15
Col20a1Q923P0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Col20a1Q923P0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16■□□□□ 0.15
Col20a1Q923P0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Col20a1Q923P0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Col20a1Q923P0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col20a1Q923P0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col20a1Q923P0 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.99■□□□□ 0.15
Col20a1Q923P0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms