Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdha3Q91Y16 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha3Q91Y16 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha3Q91Y16 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha3Q91Y16 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha3Q91Y16 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Gm8927-201ENSMUST00000181978 981 ntBASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Gm28631-201ENSMUST00000190740 334 ntBASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Gm3222-201ENSMUST00000071282 990 ntBASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha3Q91Y16 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Mir698-201ENSMUST00000102164 109 ntBASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gm15240-201ENSMUST00000118156 720 ntBASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gm5354-201ENSMUST00000182417 973 ntBASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gm27772-201ENSMUST00000184900 187 ntBASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha3Q91Y16 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha3Q91Y16 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms