Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Gm27622-201ENSMUST00000183779 60 ntBASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Gm44872-201ENSMUST00000207864 420 ntBASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhac1Q91Y10 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Gm24543-201ENSMUST00000103867 82 ntBASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhac1Q91Y10 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 AA543401-201ENSMUST00000164248 1269 ntBASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Mir6956-201ENSMUST00000183598 62 ntBASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhac1Q91Y10 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms