Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Gm15321-201ENSMUST00000121290 288 ntBASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Gm9797-201ENSMUST00000052902 613 ntBASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb1Q91Y08 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pcdhb1Q91Y08 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb1Q91Y08 Syt7-204ENSMUST00000223586 1344 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms