Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx54Q8K4L0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx54Q8K4L0 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Gm12502-201ENSMUST00000120197 444 ntBASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Gm7467-201ENSMUST00000185173 652 ntBASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Gm37835-201ENSMUST00000193305 361 ntBASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Gm18916-201ENSMUST00000198264 1246 ntBASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Gm10702-201ENSMUST00000098929 1268 ntBASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx54Q8K4L0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Gm27438-201ENSMUST00000183480 110 ntBASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Gm44262-201ENSMUST00000204969 372 ntBASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx54Q8K4L0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ddx54Q8K4L0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms