Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Gm44719-201ENSMUST00000206404 149 ntBASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Gm24589-201ENSMUST00000116692 94 ntBASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Gm27301-201ENSMUST00000184012 127 ntBASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf4Q8K4J2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Gm43347-201ENSMUST00000200226 580 ntBASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf4Q8K4J2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf4Q8K4J2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms