Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Prpf39Q8K2Z2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Gm11524-201ENSMUST00000119349 807 ntBASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Gm43094-201ENSMUST00000196549 921 ntBASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Gm19078-201ENSMUST00000206311 727 ntBASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Gm19220-201ENSMUST00000222682 803 ntBASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf39Q8K2Z2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Gm2423-201ENSMUST00000074863 733 ntBASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms