Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Syne4Q8CII8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syne4Q8CII8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Gm21769-201ENSMUST00000211922 111 ntBASIC15.32■□□□□ 0.04
Syne4Q8CII8 Gm5363-201ENSMUST00000211927 938 ntBASIC15.32■□□□□ 0.04
Syne4Q8CII8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne4Q8CII8 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.31■□□□□ 0.04
Syne4Q8CII8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.31■□□□□ 0.04
Syne4Q8CII8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.31■□□□□ 0.04
Syne4Q8CII8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Gm3890-201ENSMUST00000182416 207 ntBASIC15.31■□□□□ 0.04
Syne4Q8CII8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.31■□□□□ 0.04
Syne4Q8CII8 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.31■□□□□ 0.04
Syne4Q8CII8 Gm19163-201ENSMUST00000223313 780 ntBASIC15.31■□□□□ 0.04
Syne4Q8CII8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
Syne4Q8CII8 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.31■□□□□ 0.04
Syne4Q8CII8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.3■□□□□ 0.04
Syne4Q8CII8 Gm16479-201ENSMUST00000121706 932 ntBASIC15.3■□□□□ 0.04
Syne4Q8CII8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.3■□□□□ 0.04
Syne4Q8CII8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.3■□□□□ 0.04
Syne4Q8CII8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.3■□□□□ 0.04
Syne4Q8CII8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.3■□□□□ 0.04
Syne4Q8CII8 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.3■□□□□ 0.04
Syne4Q8CII8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.3■□□□□ 0.04
Syne4Q8CII8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Syne4Q8CII8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne4Q8CII8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms