Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm45668-201ENSMUST00000211271 493 ntBASIC13.92□□□□□ -0.18
CopaQ8CIE6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CopaQ8CIE6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.92□□□□□ -0.18
CopaQ8CIE6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CopaQ8CIE6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CopaQ8CIE6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CopaQ8CIE6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.92□□□□□ -0.18
CopaQ8CIE6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CopaQ8CIE6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CopaQ8CIE6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CopaQ8CIE6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CopaQ8CIE6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CopaQ8CIE6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CopaQ8CIE6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CopaQ8CIE6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Grk6-205ENSMUST00000224653 2976 ntBASIC13.91□□□□□ -0.18
CopaQ8CIE6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Gm15957-201ENSMUST00000118893 974 ntBASIC13.91□□□□□ -0.18
CopaQ8CIE6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Gm37917-201ENSMUST00000194711 392 ntBASIC13.91□□□□□ -0.18
CopaQ8CIE6 Gm18018-201ENSMUST00000198273 408 ntBASIC13.91□□□□□ -0.18
CopaQ8CIE6 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.91□□□□□ -0.18
CopaQ8CIE6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.91□□□□□ -0.18
CopaQ8CIE6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Gm15823-201ENSMUST00000064305 670 ntBASIC13.91□□□□□ -0.18
CopaQ8CIE6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.91□□□□□ -0.18
CopaQ8CIE6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.91□□□□□ -0.18
CopaQ8CIE6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopaQ8CIE6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Gm12138-201ENSMUST00000122180 951 ntBASIC13.9□□□□□ -0.18
CopaQ8CIE6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.9□□□□□ -0.18
CopaQ8CIE6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.9□□□□□ -0.18
CopaQ8CIE6 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.9□□□□□ -0.18
CopaQ8CIE6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms