Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rp1l1Q8CGM2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rp1l1Q8CGM2 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Gm26361-201ENSMUST00000158868 186 ntBASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Gm22058-201ENSMUST00000083393 310 ntBASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.83□□□□□ -0.2
Rp1l1Q8CGM2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rp1l1Q8CGM2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Gm37201-201ENSMUST00000191845 523 ntBASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rp1l1Q8CGM2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rp1l1Q8CGM2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rp1l1Q8CGM2 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Rp1l1Q8CGM2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rp1l1Q8CGM2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rp1l1Q8CGM2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms