Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Gm15823-201ENSMUST00000064305 670 ntBASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Gm5161-201ENSMUST00000075243 853 ntBASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Gm24447-201ENSMUST00000083977 338 ntBASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc60Q8C4J0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc60Q8C4J0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Gm14928-201ENSMUST00000120198 477 ntBASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Gm17330-201ENSMUST00000221047 165 ntBASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc60Q8C4J0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ccdc60Q8C4J0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc60Q8C4J0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc60Q8C4J0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc60Q8C4J0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc60Q8C4J0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC17.33■□□□□ 0.37
Ccdc60Q8C4J0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc60Q8C4J0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc60Q8C4J0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc60Q8C4J0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Gm13689-201ENSMUST00000119360 685 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms