Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Gm22902-201ENSMUST00000158488 302 ntBASIC17.94■□□□□ 0.46
Cps1Q8C196 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Cps1Q8C196 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.94■□□□□ 0.46
Cps1Q8C196 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC17.94■□□□□ 0.46
Cps1Q8C196 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC17.94■□□□□ 0.46
Cps1Q8C196 Gm45224-201ENSMUST00000208203 414 ntBASIC17.94■□□□□ 0.46
Cps1Q8C196 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC17.94■□□□□ 0.46
Cps1Q8C196 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Cps1Q8C196 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Daam2-202ENSMUST00000224595 1926 ntBASIC17.94■□□□□ 0.46
Cps1Q8C196 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.94■□□□□ 0.46
Cps1Q8C196 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Cps1Q8C196 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cps1Q8C196 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm13736-201ENSMUST00000119272 253 ntBASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm12566-201ENSMUST00000121479 359 ntBASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm25700-201ENSMUST00000177693 110 ntBASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm8856-201ENSMUST00000185254 1144 ntBASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm3096-201ENSMUST00000185770 364 ntBASIC17.93■□□□□ 0.46
Cps1Q8C196 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Ighv5-7-201ENSMUST00000192302 244 ntBASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cps1Q8C196 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm44405-201ENSMUST00000198952 126 ntBASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC17.93■□□□□ 0.46
Cps1Q8C196 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC17.93■□□□□ 0.46
Cps1Q8C196 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cps1Q8C196 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.92■□□□□ 0.46
Cps1Q8C196 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cps1Q8C196 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.92■□□□□ 0.46
Cps1Q8C196 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Cps1Q8C196 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.92■□□□□ 0.46
Cps1Q8C196 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Cps1Q8C196 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC17.92■□□□□ 0.46
Cps1Q8C196 Gm11930-201ENSMUST00000117788 190 ntBASIC17.92■□□□□ 0.46
Cps1Q8C196 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Gm29787-201ENSMUST00000222129 849 ntBASIC17.92■□□□□ 0.46
Cps1Q8C196 AC161537.1-201ENSMUST00000226199 1015 ntBASIC17.92■□□□□ 0.46
Cps1Q8C196 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cps1Q8C196 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cps1Q8C196 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cps1Q8C196 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cps1Q8C196 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cps1Q8C196 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cps1Q8C196 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cps1Q8C196 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cps1Q8C196 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cps1Q8C196 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cps1Q8C196 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cps1Q8C196 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Cps1Q8C196 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms