Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.77□□□□□ -0.2
Sh3rf2Q8BZT2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Sh3rf2Q8BZT2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sh3rf2Q8BZT2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh3rf2Q8BZT2 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Snora78-201ENSMUST00000158630 128 ntBASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.76□□□□□ -0.21
Sh3rf2Q8BZT2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sh3rf2Q8BZT2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms