Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Gm2445-201ENSMUST00000182798 989 ntBASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Gm7775-201ENSMUST00000218871 853 ntBASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clrn3Q8BHH8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Clrn3Q8BHH8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Clrn3Q8BHH8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Clrn3Q8BHH8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
Clrn3Q8BHH8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Clrn3Q8BHH8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Clrn3Q8BHH8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Gm38294-201ENSMUST00000192831 381 ntBASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Gm10766-202ENSMUST00000194123 606 ntBASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn3Q8BHH8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Mir7684-201ENSMUST00000183858 60 ntBASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Mir7023-201ENSMUST00000185093 64 ntBASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Gm43703-201ENSMUST00000200523 763 ntBASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn3Q8BHH8 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms