Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim50Q810I2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim50Q810I2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim50Q810I2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim50Q810I2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim50Q810I2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trim50Q810I2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim50Q810I2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Gm22189-201ENSMUST00000103822 86 ntBASIC13.27□□□□□ -0.29
Trim50Q810I2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Trim50Q810I2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.27□□□□□ -0.29
Trim50Q810I2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim50Q810I2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim50Q810I2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim50Q810I2 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.27□□□□□ -0.29
Trim50Q810I2 Gm9797-201ENSMUST00000052902 613 ntBASIC13.27□□□□□ -0.29
Trim50Q810I2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.27□□□□□ -0.29
Trim50Q810I2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Trim50Q810I2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim50Q810I2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trim50Q810I2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim50Q810I2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim50Q810I2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim50Q810I2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim50Q810I2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Trim50Q810I2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Gm16215-201ENSMUST00000161990 637 ntBASIC13.26□□□□□ -0.29
Trim50Q810I2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim50Q810I2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim50Q810I2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim50Q810I2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim50Q810I2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim50Q810I2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim50Q810I2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim50Q810I2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim50Q810I2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Trim50Q810I2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim50Q810I2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.25□□□□□ -0.29
Trim50Q810I2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.25□□□□□ -0.29
Trim50Q810I2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim50Q810I2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim50Q810I2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim50Q810I2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms