Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm3Q80WV7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Srrm3Q80WV7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm3Q80WV7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Srrm3Q80WV7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm3Q80WV7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm3Q80WV7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.24□□□□□ -0.13
Srrm3Q80WV7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm3Q80WV7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm3Q80WV7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm3Q80WV7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm3Q80WV7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm3Q80WV7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm3Q80WV7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.21□□□□□ -0.13
Srrm3Q80WV7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srrm3Q80WV7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srrm3Q80WV7 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.21□□□□□ -0.13
Srrm3Q80WV7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srrm3Q80WV7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srrm3Q80WV7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srrm3Q80WV7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srrm3Q80WV7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Srrm3Q80WV7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.21□□□□□ -0.13
Srrm3Q80WV7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms