Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 Dupd1-202ENSMUST00000224735 548 ntBASIC13.7□□□□□ -0.22
Usp8Q80U87 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Usp8Q80U87 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Usp8Q80U87 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Usp8Q80U87 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Usp8Q80U87 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Usp8Q80U87 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp8Q80U87 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Usp8Q80U87 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.69□□□□□ -0.22
Usp8Q80U87 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Usp8Q80U87 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Gm12428-201ENSMUST00000119844 727 ntBASIC13.69□□□□□ -0.22
Usp8Q80U87 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.69□□□□□ -0.22
Usp8Q80U87 Gm2445-201ENSMUST00000182798 989 ntBASIC13.69□□□□□ -0.22
Usp8Q80U87 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.69□□□□□ -0.22
Usp8Q80U87 Gm18027-201ENSMUST00000218947 619 ntBASIC13.69□□□□□ -0.22
Usp8Q80U87 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.69□□□□□ -0.22
Usp8Q80U87 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.69□□□□□ -0.22
Usp8Q80U87 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Usp8Q80U87 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Usp8Q80U87 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Usp8Q80U87 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Usp8Q80U87 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Usp8Q80U87 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usp8Q80U87 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usp8Q80U87 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp8Q80U87 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.68□□□□□ -0.22
Usp8Q80U87 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Usp8Q80U87 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Usp8Q80U87 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Gm6736-201ENSMUST00000166583 948 ntBASIC13.68□□□□□ -0.22
Usp8Q80U87 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Gm27702-201ENSMUST00000184512 56 ntBASIC13.68□□□□□ -0.22
Usp8Q80U87 Gm16476-201ENSMUST00000221544 139 ntBASIC13.68□□□□□ -0.22
Usp8Q80U87 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usp8Q80U87 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.68□□□□□ -0.22
Usp8Q80U87 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usp8Q80U87 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.67□□□□□ -0.22
Usp8Q80U87 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.67□□□□□ -0.22
Usp8Q80U87 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Usp8Q80U87 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Gm24543-201ENSMUST00000103867 82 ntBASIC13.67□□□□□ -0.22
Usp8Q80U87 Mir449b-201ENSMUST00000104833 80 ntBASIC13.67□□□□□ -0.22
Usp8Q80U87 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Usp8Q80U87 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Usp8Q80U87 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp8Q80U87 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp8Q80U87 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms