Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Gm27839-201ENSMUST00000184242 106 ntBASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Gm44719-201ENSMUST00000206404 149 ntBASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdh8Q7TSK3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Gm15376-201ENSMUST00000122258 783 ntBASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh8Q7TSK3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Gm26464-201ENSMUST00000157094 305 ntBASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh8Q7TSK3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh8Q7TSK3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms