Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.66□□□□□ -0.38
Timd4Q6U7R4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.66□□□□□ -0.38
Timd4Q6U7R4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Gm15376-201ENSMUST00000122258 783 ntBASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Gm37917-201ENSMUST00000194711 392 ntBASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Timd4Q6U7R4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Timd4Q6U7R4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.65□□□□□ -0.39
Timd4Q6U7R4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Timd4Q6U7R4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Gm14928-201ENSMUST00000120198 477 ntBASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Timd4Q6U7R4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms