Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.46□□□□□ -0.58
Rif1Q6PR54 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rif1Q6PR54 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rif1Q6PR54 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.46□□□□□ -0.58
Rif1Q6PR54 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.45□□□□□ -0.58
Rif1Q6PR54 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.45□□□□□ -0.58
Rif1Q6PR54 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.45□□□□□ -0.58
Rif1Q6PR54 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Gm11980-201ENSMUST00000121445 986 ntBASIC11.45□□□□□ -0.58
Rif1Q6PR54 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.45□□□□□ -0.58
Rif1Q6PR54 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.45□□□□□ -0.58
Rif1Q6PR54 Gm7003-201ENSMUST00000195089 312 ntBASIC11.45□□□□□ -0.58
Rif1Q6PR54 Gm43752-201ENSMUST00000198475 697 ntBASIC11.45□□□□□ -0.58
Rif1Q6PR54 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rif1Q6PR54 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.44□□□□□ -0.58
Rif1Q6PR54 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.44□□□□□ -0.58
Rif1Q6PR54 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Gm3096-201ENSMUST00000185770 364 ntBASIC11.44□□□□□ -0.58
Rif1Q6PR54 Gm42550-201ENSMUST00000201553 960 ntBASIC11.44□□□□□ -0.58
Rif1Q6PR54 Gm6722-201ENSMUST00000221586 390 ntBASIC11.44□□□□□ -0.58
Rif1Q6PR54 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.44□□□□□ -0.58
Rif1Q6PR54 Itm2b-204ENSMUST00000228637 783 ntBASIC11.44□□□□□ -0.58
Rif1Q6PR54 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.44□□□□□ -0.58
Rif1Q6PR54 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.44□□□□□ -0.58
Rif1Q6PR54 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.44□□□□□ -0.58
Rif1Q6PR54 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.44□□□□□ -0.58
Rif1Q6PR54 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.44□□□□□ -0.58
Rif1Q6PR54 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms