Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Mir7221-201ENSMUST00000184009 72 ntBASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Gm18584-201ENSMUST00000203098 964 ntBASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nup98Q6PFD9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nup98Q6PFD9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nup98Q6PFD9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nup98Q6PFD9 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.77■□□□□ 0.12
Nup98Q6PFD9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nup98Q6PFD9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nup98Q6PFD9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Gm4986-201ENSMUST00000119731 549 ntBASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Gm11964-201ENSMUST00000120982 444 ntBASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Gm12291-201ENSMUST00000121627 311 ntBASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.77■□□□□ 0.11
Nup98Q6PFD9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Gm44364-201ENSMUST00000198368 141 ntBASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Gm24526-201ENSMUST00000082921 158 ntBASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nup98Q6PFD9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Gm25043-201ENSMUST00000158604 212 ntBASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Gm9368-201ENSMUST00000219348 831 ntBASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.75■□□□□ 0.11
Nup98Q6PFD9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms