Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Gm6621-201ENSMUST00000193251 772 ntBASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Gm18753-201ENSMUST00000201000 566 ntBASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gm13297-201ENSMUST00000120205 934 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gm2231-201ENSMUST00000125661 612 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Mir3547-201ENSMUST00000175461 88 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gm38158-201ENSMUST00000194617 339 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Snrnp40Q6PE01 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Gm17376-201ENSMUST00000166016 84 ntBASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Gm2445-201ENSMUST00000182798 989 ntBASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Gm6082-201ENSMUST00000215204 454 ntBASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Snrnp40Q6PE01 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snrnp40Q6PE01 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms