Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Gm11524-201ENSMUST00000119349 807 ntBASIC13.4□□□□□ -0.26
VclQ64727 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.4□□□□□ -0.26
VclQ64727 Gm18307-201ENSMUST00000206864 949 ntBASIC13.4□□□□□ -0.26
VclQ64727 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.4□□□□□ -0.26
VclQ64727 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.4□□□□□ -0.26
VclQ64727 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.4□□□□□ -0.26
VclQ64727 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VclQ64727 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.4□□□□□ -0.26
VclQ64727 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VclQ64727 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VclQ64727 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
VclQ64727 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.39□□□□□ -0.27
VclQ64727 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.39□□□□□ -0.27
VclQ64727 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
VclQ64727 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
VclQ64727 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Gm12485-201ENSMUST00000119641 291 ntBASIC13.39□□□□□ -0.27
VclQ64727 Gm12341-201ENSMUST00000119724 503 ntBASIC13.39□□□□□ -0.27
VclQ64727 Gm14928-201ENSMUST00000120198 477 ntBASIC13.39□□□□□ -0.27
VclQ64727 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.39□□□□□ -0.27
VclQ64727 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.39□□□□□ -0.27
VclQ64727 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.39□□□□□ -0.27
VclQ64727 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.39□□□□□ -0.27
VclQ64727 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.39□□□□□ -0.27
VclQ64727 Gm6745-201ENSMUST00000199216 526 ntBASIC13.39□□□□□ -0.27
VclQ64727 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.39□□□□□ -0.27
VclQ64727 Gm19078-201ENSMUST00000206311 727 ntBASIC13.39□□□□□ -0.27
VclQ64727 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
VclQ64727 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
VclQ64727 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
VclQ64727 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
VclQ64727 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
VclQ64727 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.39□□□□□ -0.27
VclQ64727 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VclQ64727 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.39□□□□□ -0.27
VclQ64727 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.39□□□□□ -0.27
VclQ64727 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.39□□□□□ -0.27
VclQ64727 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
VclQ64727 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.38□□□□□ -0.27
VclQ64727 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.38□□□□□ -0.27
VclQ64727 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
VclQ64727 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms