Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rai1Q61818 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rai1Q61818 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rai1Q61818 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rai1Q61818 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rai1Q61818 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rai1Q61818 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Rai1Q61818 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Rai1Q61818 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rai1Q61818 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rai1Q61818 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rai1Q61818 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rai1Q61818 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rai1Q61818 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.96□□□□□ -0.34
Rai1Q61818 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rai1Q61818 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Gm11222-201ENSMUST00000119005 738 ntBASIC12.95□□□□□ -0.34
Rai1Q61818 Gm16570-201ENSMUST00000161951 436 ntBASIC12.95□□□□□ -0.34
Rai1Q61818 Gm3786-201ENSMUST00000202659 378 ntBASIC12.95□□□□□ -0.34
Rai1Q61818 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Rps4l-202ENSMUST00000204242 789 ntBASIC12.95□□□□□ -0.34
Rai1Q61818 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rai1Q61818 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.95□□□□□ -0.34
Rai1Q61818 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rai1Q61818 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.95□□□□□ -0.34
Rai1Q61818 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.95□□□□□ -0.34
Rai1Q61818 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rai1Q61818 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rai1Q61818 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rai1Q61818 Gm8805-201ENSMUST00000117848 313 ntBASIC12.95□□□□□ -0.34
Rai1Q61818 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.95□□□□□ -0.34
Rai1Q61818 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.95□□□□□ -0.34
Rai1Q61818 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.95□□□□□ -0.34
Rai1Q61818 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.95□□□□□ -0.34
Rai1Q61818 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.95□□□□□ -0.34
Rai1Q61818 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Gm32025-201ENSMUST00000217960 307 ntBASIC12.95□□□□□ -0.34
Rai1Q61818 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Rai1Q61818 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rai1Q61818 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rai1Q61818 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rai1Q61818 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rai1Q61818 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rai1Q61818 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.94□□□□□ -0.34
Rai1Q61818 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.94□□□□□ -0.34
Rai1Q61818 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.94□□□□□ -0.34
Rai1Q61818 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rai1Q61818 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.94□□□□□ -0.34
Rai1Q61818 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.94□□□□□ -0.34
Rai1Q61818 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Rai1Q61818 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rai1Q61818 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.94□□□□□ -0.34
Rai1Q61818 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.94□□□□□ -0.34
Rai1Q61818 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Gm5363-201ENSMUST00000211927 938 ntBASIC12.94□□□□□ -0.34
Rai1Q61818 Gm19163-201ENSMUST00000223313 780 ntBASIC12.94□□□□□ -0.34
Rai1Q61818 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rai1Q61818 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Mir433-201ENSMUST00000093564 124 ntBASIC12.94□□□□□ -0.34
Rai1Q61818 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rai1Q61818 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rai1Q61818 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rai1Q61818 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rai1Q61818 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms