Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.17□□□□□ -0.78
Foxc1Q61572 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Dupd1-202ENSMUST00000224735 548 ntBASIC10.17□□□□□ -0.78
Foxc1Q61572 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.17□□□□□ -0.78
Foxc1Q61572 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.17□□□□□ -0.78
Foxc1Q61572 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.17□□□□□ -0.78
Foxc1Q61572 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Foxc1Q61572 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Foxc1Q61572 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Foxc1Q61572 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Foxc1Q61572 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.16□□□□□ -0.78
Foxc1Q61572 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Foxc1Q61572 Gm8988-201ENSMUST00000155015 1240 ntBASIC10.16□□□□□ -0.78
Foxc1Q61572 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Gm27680-201ENSMUST00000184192 160 ntBASIC10.16□□□□□ -0.78
Foxc1Q61572 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Gm16476-201ENSMUST00000221544 139 ntBASIC10.16□□□□□ -0.78
Foxc1Q61572 AC162940.1-201ENSMUST00000224745 1167 ntBASIC10.16□□□□□ -0.78
Foxc1Q61572 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.16□□□□□ -0.78
Foxc1Q61572 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.16□□□□□ -0.78
Foxc1Q61572 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Foxc1Q61572 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Foxc1Q61572 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Foxc1Q61572 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.15□□□□□ -0.78
Foxc1Q61572 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Foxc1Q61572 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Foxc1Q61572 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Foxc1Q61572 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.15□□□□□ -0.78
Foxc1Q61572 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Foxc1Q61572 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Foxc1Q61572 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.15□□□□□ -0.78
Foxc1Q61572 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.15□□□□□ -0.78
Foxc1Q61572 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC10.15□□□□□ -0.78
Foxc1Q61572 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.15□□□□□ -0.78
Foxc1Q61572 Gm17983-201ENSMUST00000190766 594 ntBASIC10.15□□□□□ -0.78
Foxc1Q61572 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.15□□□□□ -0.78
Foxc1Q61572 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Gm44344-201ENSMUST00000200287 129 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms