Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcd1Q61466 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.15□□□□□ -0.14
Smarcd1Q61466 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.15□□□□□ -0.14
Smarcd1Q61466 Gm18187-201ENSMUST00000196476 984 ntBASIC14.15□□□□□ -0.14
Smarcd1Q61466 Gm18473-201ENSMUST00000220543 868 ntBASIC14.15□□□□□ -0.14
Smarcd1Q61466 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarcd1Q61466 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Gm8602-201ENSMUST00000184045 607 ntBASIC14.14□□□□□ -0.15
Smarcd1Q61466 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.14□□□□□ -0.15
Smarcd1Q61466 Gm26315-201ENSMUST00000083890 321 ntBASIC14.14□□□□□ -0.15
Smarcd1Q61466 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.14□□□□□ -0.15
Smarcd1Q61466 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd1Q61466 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Gm6152-201ENSMUST00000151704 340 ntBASIC14.13□□□□□ -0.15
Smarcd1Q61466 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcd1Q61466 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms