Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Six4Q61321 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six4Q61321 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.74□□□□□ -0.21
Six4Q61321 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six4Q61321 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.74□□□□□ -0.21
Six4Q61321 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Six4Q61321 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six4Q61321 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Six4Q61321 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.73□□□□□ -0.21
Six4Q61321 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Six4Q61321 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.73□□□□□ -0.21
Six4Q61321 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Six4Q61321 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.73□□□□□ -0.21
Six4Q61321 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.73□□□□□ -0.21
Six4Q61321 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Six4Q61321 Gm18307-201ENSMUST00000206864 949 ntBASIC13.73□□□□□ -0.21
Six4Q61321 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.73□□□□□ -0.21
Six4Q61321 Gm6180-201ENSMUST00000065243 498 ntBASIC13.73□□□□□ -0.21
Six4Q61321 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.73□□□□□ -0.21
Six4Q61321 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Six4Q61321 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.72□□□□□ -0.21
Six4Q61321 Gm23984-201ENSMUST00000157139 203 ntBASIC13.72□□□□□ -0.21
Six4Q61321 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Six4Q61321 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.72□□□□□ -0.21
Six4Q61321 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Six4Q61321 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.72□□□□□ -0.21
Six4Q61321 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Six4Q61321 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
Six4Q61321 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.71□□□□□ -0.21
Six4Q61321 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.71□□□□□ -0.21
Six4Q61321 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Six4Q61321 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.71□□□□□ -0.21
Six4Q61321 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.71□□□□□ -0.21
Six4Q61321 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.71□□□□□ -0.21
Six4Q61321 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.71□□□□□ -0.21
Six4Q61321 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Six4Q61321 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.71□□□□□ -0.21
Six4Q61321 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Six4Q61321 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Six4Q61321 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms