Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Srrm1Q52KI8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Mir698-201ENSMUST00000102164 109 ntBASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Gm22323-201ENSMUST00000103832 109 ntBASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Gm12997-201ENSMUST00000120207 640 ntBASIC15.22■□□□□ 0.03
Srrm1Q52KI8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Gm6621-201ENSMUST00000193251 772 ntBASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Gm6082-201ENSMUST00000215204 454 ntBASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Srrm1Q52KI8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Gm2383-201ENSMUST00000181461 807 ntBASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Gm38158-201ENSMUST00000194617 339 ntBASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Srrm1Q52KI8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.21■□□□□ 0.02
Srrm1Q52KI8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Srrm1Q52KI8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Srrm1Q52KI8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Srrm1Q52KI8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Srrm1Q52KI8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms