Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.52■□□□□ 0.24
Shank3Q4ACU6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Gm44126-201ENSMUST00000204831 514 ntBASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank3Q4ACU6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank3Q4ACU6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Gm13492-201ENSMUST00000119772 665 ntBASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Gm44100-201ENSMUST00000204329 436 ntBASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Gm8285-201ENSMUST00000208293 759 ntBASIC16.51■□□□□ 0.23
Shank3Q4ACU6 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.51■□□□□ 0.23
Shank3Q4ACU6 Gm12291-201ENSMUST00000121627 311 ntBASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.5■□□□□ 0.23
Shank3Q4ACU6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank3Q4ACU6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shank3Q4ACU6 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms