Protein–RNA interactions for Protein: Q3UYV9

Ncbp1, Nuclear cap-binding protein subunit 1, mousemouse

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp1Q3UYV9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ncbp1Q3UYV9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ncbp1Q3UYV9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ncbp1Q3UYV9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ncbp1Q3UYV9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ncbp1Q3UYV9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ncbp1Q3UYV9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ncbp1Q3UYV9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Gm17794-201ENSMUST00000220252 955 ntBASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ncbp1Q3UYV9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Gm15678-201ENSMUST00000117573 960 ntBASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Gm12485-201ENSMUST00000119641 291 ntBASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.28■□□□□ 0.2
Ncbp1Q3UYV9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms